Transcriptomics

A transcriptomic cell-atlas of reef coral bleaching
Using single-cell transcriptomics to understand the heat stress response of reef coral holobionts.
Preprint: A Single-Cell Atlas of Coral Bleaching
A transcriptomic cell-atlas of reef coral bleaching
Koch at the reef — Understanding coral disease
A systems biology approach to the study of reef coral infectious diseases.
Koch at the reef — Understanding coral disease
Marine animal microbiomes
Exploring the prokaryotic and microeukaryotic communities associated with marine model organisms — the Gulf Toadfish and the California Sea Hare.
Preprint: Toadfish gut bacteria & CaCO₃ Paper: Fish carbonates & global carbon cycle
Marine animal microbiomes
The rhythm of the reef — Diel cycles of the coral holobiont
A systems biology approach to studying the diel transcriptional and microbial rhythms of reef coral holobionts.
Publication: Cell Host & Microbe (2026)
The rhythm of the reef — Diel cycles of the coral holobiont