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EukRef: phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution
Environmental sequencing has greatly expanded our knowledge of micro-eukaryotic diversity and ecology by revealing previously unknown …
Javier del Campo
,
Martin Kolisko
,
Vittorio Boscaro
,
Luciana F Santoferrara
,
Serafim Nenarokov
,
Ramon Massana
,
Laure Guillou
,
Alastair Simpson
,
Cedric Berney
,
Colomban De Vargas
,
Others
DOI
Global Diversity and Distribution of Close Relatives of Apicomplexan Parasites
Apicomplexans are a group of obligate intracellular parasites, but their retention of a relict non-photosynthetic plastid reveals that …
Varsha Mathur
,
Javier del Campo
,
Martin Kolisko
,
Patrick J. Keeling
DOI
Metabarcoding analysis on European coastal samples reveals new molecular metazoan diversity
Although animals are among the best studied organisms, we still lack a full description of their diversity, especially for microscopic …
David Lopez-Escardo
,
Jordi Paps
,
Colomban De Vargas
,
Ramon Massana
,
Inaki Ruiz-Trillo
,
Javier del Campo
DOI
EukRef–Ciliophora: A manually curated, phylogeny-based database of small subunit rRNA gene sequences of ciliates
High-throughput sequencing (HTS) surveys, among the most common approaches currently used in environmental microbiology, require …
Vittorio Boscaro
,
Luciana F. Santoferrara
,
Qianqian Zhang
,
Eleni Gentekaki
,
Mitchell J. Syberg-Olsen
,
Javier del Campo
,
Patrick J. Keeling
DOI
High-throughput environmental sequencing reveals high diversity of litter and moss associated protist communities along a gradient of drainage and tree productivity
Although previous studies, mostly based on microscopy analyses of a few groups of protists, have suggested that protists are abundant …
Thierry J. Heger
,
Ian J.W. Giesbrecht
,
Julia Gustavsen
,
Javier del Campo
,
Colleen T.E Kellogg
,
Kira M. Hoffman
,
Ken Lertzman
,
William W. Mohn
,
Patrick J. Keeling
DOI
Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing
Photosynthetic picoeukaryotes contribute a significant fraction of primary production in the upper ocean. Micromonas pusilla is an …
William D Orsi
,
Susanne Wilken
,
Javier del Campo
,
Thierry Heger
,
Erick James
,
Thomas a Richards
,
Patrick J Keeling
,
Alexandra Z Worden
,
Alyson E Santoro
DOI
Fish Parasite Dinoflagellates Haidadinium ichthyophilum and Piscinoodinium Share a Recent Common Ancestor
The dinoflagellate Haidadinium ichthyophilum Buckland-Nicks, Reimchen and Garbary 1997 is an ectoparasite of the spine-deficient, …
Elisabeth Hehenberger
,
Erick R. James
,
Javier del Campo
,
John A. Buckland-Nicks
,
Thomas E. Reimchen
,
Patrick J. Keeling
DOI
Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates
Marine alveolates (MALVs) are diverse and widespread early-branching dinoflagellates, but most knowledge of the group comes from a few …
Jürgen FH Strassert
,
Anna Karnkowska
,
Elisabeth Hehenberger
,
Javier del Campo
,
Martin Kolisko
,
Noriko Okamoto
,
Fabien Burki
,
Jan Janouskovec
,
Camille Poirier
,
Guy Leonard
,
Others
DOI
Pseudotrichonympha leei, Pseudotrichonympha lifesoni, and Pseudotrichonympha pearti, new species of parabasalian flagellates and the description of a rotating subcellular structure
Pseudotrichonympha is a large and structurally complex genus of parabasalian protists that play a key role in the digestion of …
Javier del Campo
,
Erick R. James
,
Yoshihisa Hirakawa
,
Rebecca Fiorito
,
Martin Kolisko
,
Nicholas A. T. Irwin
,
Varsha Mathur
,
Vittorio Boscaro
,
Elisabeth Hehenberger
,
Anna Karnkowska
,
Others
DOI
Molecular characterization and phylogeny of four new species of the genus Trichonympha (Parabasalia, Trichonymphea) from lower termite hindguts
Members of the genus Trichonympha are among the most well-known, recognizable and widely distributed parabasalian symbionts of lower …
Vittorio Boscaro
,
Erick R James
,
Rebecca Fiorito
,
Elisabeth Hehenberger
,
Anna Karnkowska
,
Javier del Campo
,
Martin Kolisko
,
Nicholas A.T. Irwin
,
Varsha Mathur
,
Rudolf H Scheffrahn
,
Others
DOI
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